ZFIN is now using GRCz12tu for Genomic Data
Gene
sycp2l
- ID
- ZDB-GENE-130924-1
- Name
- synaptonemal complex protein 2-like
- Symbol
- sycp2l Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 24 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be located in chromosome and nucleus. Human ortholog(s) of this gene implicated in primary ovarian insufficiency and spermatogenic failure 1. Orthologous to several human genes including SYCP2L (synaptonemal complex protein 2 like).
- Genome Resources
-
- Alliance (1)
- Gene:100149910 (1)
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Premature ovarian failure 24 | 620840 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Synaptonemal complex protein 2, armadillo-repeat-like domain | Synaptonemal complex protein 2-like | Synaptonemal complex protein 2, Spt16M-like domain |
|---|---|---|---|---|---|
| UniProtKB:A0A8M6YVU8 | InterPro | 714 | |||
| UniProtKB:A0A8M6YYB4 | InterPro | 744 | |||
| UniProtKB:A0A8M6Z4W9 | InterPro | 744 | |||
| UniProtKB:A0AB13A844 | InterPro | 795 | |||
| UniProtKB:A0AB13A8K7 | InterPro | 798 | |||
| UniProtKB:A0AC58IP66 | InterPro | 806 | |||
| UniProtKB:A0AC58IP67 | InterPro | 828 | |||
| UniProtKB:A0AC58IP74 | InterPro | 803 | |||
| UniProtKB:A0AC58IP96 | InterPro | 836 | |||
| UniProtKB:A0AC58IP98 | InterPro | 833 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance