ZFIN is now using GRCz12tu for Genomic Data
Gene
tanc1a
- ID
- ZDB-GENE-130530-819
- Name
- tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1a
- Symbol
- tanc1a Nomenclature History
- Previous Names
-
- zmp:0000000816 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in regulation of postsynapse organization. Predicted to be located in postsynapse. Predicted to be active in glutamatergic synapse and postsynaptic density, intracellular component. Orthologous to human TANC1 (tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR050889 | Dendritic Spine Regulation and Scaffold |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR036770 | Ankyrin repeat-containing domain superfamily |
| Repeat | IPR002110 | Ankyrin repeat |
| Repeat | IPR019734 | Tetratricopeptide repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Ankyrin repeat | Ankyrin repeat-containing domain superfamily | Dendritic Spine Regulation and Scaffold | P-loop containing nucleoside triphosphate hydrolase | Tetratricopeptide-like helical domain superfamily | Tetratricopeptide repeat |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7F6L6 | InterPro | 1781 | ||||||
| UniProtKB:A0A8M1QUT1 | InterPro | 1771 | ||||||
| UniProtKB:A0A8M2BD49 | InterPro | 1638 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tanc1a-201
(1)
|
Ensembl | 5,393 nt | ||
| mRNA |
tanc1a-202
(1)
|
Ensembl | 6,470 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance