ZFIN is now using GRCz12tu for Genomic Data
Gene
brpf3a
- ID
- ZDB-GENE-130530-730
- Name
- bromodomain and PHD finger containing, 3a
- Symbol
- brpf3a Nomenclature History
- Previous Names
-
- zmp:0000000727 (1)
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable metal ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of MOZ/MORF histone acetyltransferase complex. Orthologous to human BRPF3 (bromodomain and PHD finger containing 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019786 | Zinc finger, PHD-type, conserved site |
| Domain | IPR000313 | PWWP domain |
| Domain | IPR001487 | Bromodomain |
| Domain | IPR001965 | Zinc finger, PHD-type |
| Domain | IPR019542 | Enhancer of polycomb-like, N-terminal |
| Domain | IPR019787 | Zinc finger, PHD-finger |
| Domain | IPR034732 | Extended PHD (ePHD) domain |
| Domain | IPR042005 | BRPF3, ePHD domain |
| Family | IPR050701 | Histone Modification Regulator |
| Homologous_superfamily | IPR011011 | Zinc finger, FYVE/PHD-type |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR036427 | Bromodomain-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Bromodomain | Bromodomain-like superfamily | BRPF3, ePHD domain | Enhancer of polycomb-like, N-terminal | Extended PHD (ePHD) domain | Histone Modification Regulator | PWWP domain | Zinc finger, FYVE/PHD-type | Zinc finger, PHD-finger | Zinc finger, PHD-type | Zinc finger, PHD-type, conserved site | Zinc finger, RING/FYVE/PHD-type |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BGP9 | InterPro | 1214 | ||||||||||||
| UniProtKB:A0A8M9QM13 | InterPro | 1052 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
brpf3a-201
(1)
|
Ensembl | 2,790 nt | ||
| mRNA |
brpf3a-202
(1)
|
Ensembl | 5,553 nt | ||
| mRNA |
brpf3a-203
(1)
|
Ensembl | 2,253 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance