ZFIN is now using GRCz12tu for Genomic Data
Gene
zmp:0000000650
- ID
- ZDB-GENE-130530-653
- Name
- zmp:0000000650
- Symbol
- zmp:0000000650 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 4 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable sialic acid binding activity. Predicted to be involved in cell adhesion. Predicted to act upstream of or within cell-cell adhesion. Predicted to be located in membrane. Predicted to be active in plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR003598 | Immunoglobulin subtype 2 |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013162 | CD80-like, immunoglobulin C2-set |
| Family | IPR003989 | Vascular cell adhesion molecule-1 |
| Family | IPR051036 | Sialic acid-binding Ig-like lectin |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | CD80-like, immunoglobulin C2-set | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin subtype 2 | Sialic acid-binding Ig-like lectin | Vascular cell adhesion molecule-1 |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1QB39 | InterPro | 363 | ||||||||
| UniProtKB:A0A8M6YX94 | InterPro | 577 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zmp:0000000650-201
(1)
|
Ensembl | 2,012 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance