ZFIN is now using GRCz12tu for Genomic Data
Gene
smpd2b
- ID
- ZDB-GENE-130530-640
- Name
- sphingomyelin phosphodiesterase 2b
- Symbol
- smpd2b Nomenclature History
- Previous Names
-
- zmp:0000000637 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable sphingomyelin phosphodiesterase activity. Predicted to be involved in ceramide biosynthetic process; sphingolipid catabolic process; and sphingomyelin metabolic process. Predicted to be located in membrane. Predicted to be active in caveola and endoplasmic reticulum. Orthologous to human SMPD2 (sphingomyelin phosphodiesterase 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Endonuclease/exonuclease/phosphatase | Endonuclease/exonuclease/phosphatase superfamily | Sphingomyelinase C/Sphingomyelin phosphodiesterase 2-like |
|---|---|---|---|---|---|
| UniProtKB:E7FBR1 | InterPro | 436 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
smpd2b-201
(1)
|
Ensembl | 4,524 nt | ||
| mRNA |
smpd2b-202
(1)
|
Ensembl | 1,281 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance