Gene
chd6
- ID
- ZDB-GENE-130530-559
- Name
- chromodomain helicase DNA binding protein 6
- Symbol
- chd6 Nomenclature History
- Previous Names
-
- si:dkey-6e2.3
- zmp:0000000556 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Description
- Predicted to enable several functions, including ATP hydrolysis activity; ATP-dependent chromatin remodeler activity; and histone binding activity. Predicted to be involved in chromatin remodeling and regulation of gene expression. Predicted to be active in chromatin and nucleus. Orthologous to human CHD6 (chromodomain helicase DNA binding protein 6).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000330 | SNF2, N-terminal |
| Domain | IPR000953 | Chromo/chromo shadow domain |
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR006576 | BRK domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR023780 | Chromo domain |
| Domain | IPR049730 | SNF2/RAD5-like, C-terminal helicase domain |
| Family | IPR051493 | Chromodomain-helicase-DNA-binding |
| Homologous_superfamily | IPR016197 | Chromo-like domain superfamily |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR037259 | BRK domain superfamily |
| Homologous_superfamily | IPR038718 | SNF2-like, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Length | BRK domain | BRK domain superfamily | Chromo/chromo shadow domain | Chromo domain | Chromodomain-helicase-DNA-binding | Chromo-like domain superfamily | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | SNF2-like, N-terminal domain superfamily | SNF2, N-terminal | SNF2/RAD5-like, C-terminal helicase domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PNA9
|
2951 | ||||||||||||
|
UniProtKB:X1WCW5
|
2935 | ||||||||||||
|
UniProtKB:A0A8N7T870
|
2953 | ||||||||||||
|
UniProtKB:A0A8M3ATN8
|
2949 | ||||||||||||
|
UniProtKB:A0A8M3BAM2
|
2952 |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance