ZFIN is now using GRCz12tu for Genomic Data
Gene
tsg101b
- ID
- ZDB-GENE-130530-542
- Name
- tumor susceptibility 101b
- Symbol
- tsg101b Nomenclature History
- Previous Names
-
- zmp:0000000539 (1)
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin binding activity. Predicted to be involved in endosome to lysosome transport. Predicted to be located in endosome and nucleus. Predicted to be part of ESCRT I complex. Human ortholog(s) of this gene implicated in breast cancer; breast carcinoma; cervix carcinoma; endometrial adenocarcinoma; and prostate cancer. Orthologous to human TSG101 (tumor susceptibility 101).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR008883 | Ubiquitin E2 variant, N-terminal |
| Domain | IPR017916 | Steadiness box (SB) domain |
| Family | IPR052070 | ESCRT-I complex UEV domain-containing protein |
| Homologous_superfamily | IPR016135 | Ubiquitin-conjugating enzyme/RWD-like |
| Homologous_superfamily | IPR037202 | ESCRT assembly domain |
Domain Details Per Protein
| Protein | Additional Resources | Length | ESCRT assembly domain | ESCRT-I complex UEV domain-containing protein | Steadiness box (SB) domain | Ubiquitin-conjugating enzyme/RWD-like | Ubiquitin E2 variant, N-terminal |
|---|---|---|---|---|---|---|---|
| UniProtKB:E7F4Y8 | InterPro | 393 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
tsg101b-201
(1)
|
Ensembl | 3,297 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance