Gene

si:dkey-286j17.4

ID

ZDB-GENE-130530-2

Name

si:dkey-286j17.4

Symbol

si:dkey-286j17.4 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Predicted to have ATP binding activity. Predicted to be involved in intracellular signal transduction.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With si:dkey-286j17.4 Human Ortholog

No data available

Associated With si:dkey-286j17.4 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR007111	NACHT nucleoside triphosphatase
Domain	IPR029495	NACHT-associated domain
Domain	IPR041075	NOD1/2, winged helix domain
Domain	IPR041267	NACHT, LRR and PYD domains-containing protein, helical domain HD2
Family	IPR050637	NLRP family, innate immunity and inflammation regulators
Homologous_superfamily	IPR027417	P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Repeat	IPR001611	Leucine-rich repeat
Repeat	IPR003591	Leucine-rich repeat, typical subtype
Repeat	IPR006553	Leucine-rich repeat, cysteine-containing subtype

Domain Details Per Protein

Protein	Length	Leucine-rich repeat	Leucine-rich repeat, cysteine-containing subtype	Leucine-rich repeat domain superfamily	Leucine-rich repeat, typical subtype	NACHT-associated domain	NACHT, LRR and PYD domains-containing protein, helical domain HD2	NACHT nucleoside triphosphatase	NLRP family, innate immunity and inflammation regulators	NOD1/2, winged helix domain	P-loop containing nucleoside triphosphate hydrolase
UniProtKB:U3JB30 InterPro	2579
UniProtKB:A0A8M3AM61 InterPro	2463
UniProtKB:A0A8M9PS16 InterPro	2920

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	si:dkey-286j17.4-201 (1) Ensembl	Ensembl	8,110 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-202 (1) Ensembl	Ensembl	1,309 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-203 (1) Ensembl	Ensembl	4,088 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-204 (1) Ensembl	Ensembl	4,144 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-205 (1) Ensembl	Ensembl	520 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-206 (1) Ensembl	Ensembl	1,467 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-207 (1) Ensembl	Ensembl	2,315 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-208 (1) Ensembl	Ensembl	968 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-209 (1) Ensembl	Ensembl	4,452 nt	Select Tool ZFIN BLAST
mRNA	si:dkey-286j17.4-210 (1) Ensembl	Ensembl	3,846 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations