ZFIN is now using GRCz12tu for Genomic Data
Gene
si:dkey-286j17.4
- ID
- ZDB-GENE-130530-2
- Name
- si:dkey-286j17.4
- Symbol
- si:dkey-286j17.4 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in regulation of signal transduction. Predicted to be active in cytoplasm.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR007111 | NACHT nucleoside triphosphatase |
| Domain | IPR029495 | NACHT-associated domain |
| Domain | IPR041075 | NOD1/2, winged helix domain |
| Domain | IPR041267 | NACHT, LRR and PYD domains-containing protein, helical domain HD2 |
| Family | IPR051261 | NOD-like receptor |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR006553 | Leucine-rich repeat, cysteine-containing subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Leucine-rich repeat | Leucine-rich repeat, cysteine-containing subtype | Leucine-rich repeat domain superfamily | NACHT-associated domain | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | NACHT nucleoside triphosphatase | NOD1/2, winged helix domain | NOD-like receptor | P-loop containing nucleoside triphosphate hydrolase |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:U3JB30 | InterPro | 2579 | |||||||||
| UniProtKB:A0A8M3AM61 | InterPro | 2463 | |||||||||
| UniProtKB:A0A8M9PS16 | InterPro | 2920 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-286j17.4-201
(1)
|
Ensembl | 8,110 nt | ||
| mRNA |
si:dkey-286j17.4-202
(1)
|
Ensembl | 1,309 nt | ||
| mRNA |
si:dkey-286j17.4-203
(1)
|
Ensembl | 4,088 nt | ||
| mRNA |
si:dkey-286j17.4-204
(1)
|
Ensembl | 4,144 nt | ||
| mRNA |
si:dkey-286j17.4-205
(1)
|
Ensembl | 520 nt | ||
| mRNA |
si:dkey-286j17.4-206
(1)
|
Ensembl | 1,467 nt | ||
| mRNA |
si:dkey-286j17.4-207
(1)
|
Ensembl | 2,315 nt | ||
| mRNA |
si:dkey-286j17.4-208
(1)
|
Ensembl | 968 nt | ||
| mRNA |
si:dkey-286j17.4-209
(1)
|
Ensembl | 4,452 nt | ||
| mRNA |
si:dkey-286j17.4-210
(1)
|
Ensembl | 3,846 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers