ZFIN is now using GRCz12tu for Genomic Data
Gene
clstn2b
- ID
- ZDB-GENE-121214-77
- Name
- calsyntenin 2b
- Symbol
- clstn2b Nomenclature History
- Previous Names
-
- si:ch211-276c2.2
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cell-cell adhesion mediator activity. Predicted to be involved in homophilic cell-cell adhesion; positive regulation of synapse assembly; and positive regulation of synaptic transmission. Predicted to be located in several cellular components, including Golgi membrane; endoplasmic reticulum membrane; and postsynaptic membrane. Predicted to be active in cell surface and postsynaptic density membrane. Orthologous to human CLSTN2 (calsyntenin 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Cadherin-like | Cadherin-like superfamily | Calsyntenin, C-terminal | Concanavalin A-like lectin/glucanase domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:R4GEC6 | InterPro | 917 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:ch211-276c2.2-201
(1)
|
Ensembl | 3,490 nt | ||
| ncRNA |
si:ch211-276c2.2-002
(1)
|
Ensembl | 398 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance