Gene

arid5b

ID
ZDB-GENE-121214-272
Name
AT-rich interaction domain 5B
Symbol
arid5b Nomenclature History
Previous Names
  • si:dkey-247f17.3
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to have transcription coactivator activity and transcription regulatory region DNA binding activity. Predicted to be involved in adipose tissue development and positive regulation of DNA-binding transcription factor activity. Predicted to localize to nucleus. Orthologous to human ARID5B (AT-rich interaction domain 5B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With arid5b Human Ortholog
No data available
Associated With arid5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001606 ARID DNA-binding domain
Domain IPR030408 AT-rich interactive domain-containing protein 5B, ARID/BRIGHT DNA binding domain
Family IPR051232 AT-rich Interactive Domain/SWI1 Chromatin Remodeling
Homologous_superfamily IPR036431 ARID DNA-binding domain superfamily
Domain Details Per Protein
Protein Length ARID DNA-binding domain ARID DNA-binding domain superfamily AT-rich interactive domain-containing protein 5B, ARID/BRIGHT DNA binding domain AT-rich Interactive Domain/SWI1 Chromatin Remodeling
UniProtKB:E7F888 1044
UniProtKB:A0A8M6Z9G4 1079
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA arid5b-201 (1) Ensembl 3,153 nt
mRNA arid5b-202 (1) Ensembl 3,607 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations