ZFIN is now using GRCz12tu for Genomic Data
Gene
lrrc52
- ID
- ZDB-GENE-121214-255
- Name
- leucine rich repeat containing 52
- Symbol
- lrrc52 Nomenclature History
- Previous Names
-
- si:dkey-52j6.3
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within monoatomic ion transmembrane transport. Predicted to be located in plasma membrane. Orthologous to human LRRC52 (leucine rich repeat containing 52).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000483 | Cysteine-rich flanking region, C-terminal |
| Family | IPR051432 | Voltage and calcium-activated potassium channel auxiliary protein |
| Homologous_superfamily | IPR032675 | Leucine-rich repeat domain superfamily |
| Repeat | IPR001611 | Leucine-rich repeat |
| Repeat | IPR003591 | Leucine-rich repeat, typical subtype |
Domain Details Per Protein
| Protein | Additional Resources | Length | Cysteine-rich flanking region, C-terminal | Leucine-rich repeat | Leucine-rich repeat domain superfamily | Leucine-rich repeat, typical subtype | Voltage and calcium-activated potassium channel auxiliary protein |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB32TA04 | InterPro | 325 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
lrrc52-201
(1)
|
Ensembl | 2,025 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers