Gene

pcif1

ID
ZDB-GENE-120920-2
Name
phosphorylated CTD interacting factor 1
Symbol
pcif1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Enables S-adenosyl-L-methionine binding activity and mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity. Involved in mRNA processing. Predicted to be active in nucleus. Orthologous to human PCIF1 (phosphorylated CTD interacting factor 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcif1 Human Ortholog
No data available
Associated With pcif1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001202 WW domain
Domain IPR022035 PCIF1, WW domain
Family IPR039881 mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-like
Homologous_superfamily IPR029048 Heat shock protein 70kD, C-terminal domain superfamily
Homologous_superfamily IPR036020 WW domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Heat shock protein 70kD, C-terminal domain superfamily mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase PCIF1-like PCIF1, WW domain WW domain WW domain superfamily
UniProtKB:A0AB13AB81 InterPro 721
UniProtKB:A0A0R4IKJ1 InterPro PDB 721
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pcif1-201 (1) Ensembl 3,273 nt
mRNA pcif1-202 (1) Ensembl 2,166 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations