Gene

cd109

ID
ZDB-GENE-120215-253
Name
CD109 molecule
Symbol
cd109 Nomenclature History
Previous Names
  • si:zfos-875e8.2
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to enable endopeptidase inhibitor activity. Predicted to be located in extracellular space. Orthologous to human CD109 (CD109 molecule).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa39309Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
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Sequence Targeting Reagents
No data available
Human Disease
Associated With cd109 Human Ortholog
No data available
Associated With cd109 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019742 Alpha-2-macroglobulin, conserved site
Conserved_site IPR047565 Alpha-macroglobulin-like, thiol-ester bond-forming region
Domain IPR001599 Alpha-2-macroglobulin
Domain IPR002890 Macroglobulin domain
Domain IPR009048 Alpha-macroglobulin, receptor-binding
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Domain Details Per Protein
Protein Additional Resources Length Alpha-2-macroglobulin Alpha-2-macroglobulin, bait region domain Alpha-2-macroglobulin/Complement system Alpha-2-macroglobulin, conserved site Alpha-2-macroglobulin, TED domain Alpha-macroglobulin-like, TED domain Alpha-macroglobulin-like, thiol-ester bond-forming region Alpha-macroglobulin, receptor-binding Alpha-macroglobulin, receptor-binding domain superfamily Immunoglobulin-like fold Macroglobulin domain Macroglobulin domain MG3 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
UniProtKB:A0A8M3ATH0 InterPro 1486
UniProtKB:A0A8N7UTF1 InterPro 1487
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 20
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cd109-201 (1)
Ensembl
Ensembl 4,036 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inFosmidCH1073-185L7ZFIN Curated Data
Contained inFosmidZFOS-875E8ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_009294995 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:CU525921 (2)38484 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8N7UTF1 (1)1487 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanCD1096
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
MouseCd1099
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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