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General Information
ZIRC
ZFIN ID: ZDB-GENE-120207-1
Gene Name: mitogen-activated protein kinase binding protein 1
Gene Symbol: mapkbp1
Sequence Ontology ID : SO:0000704

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Previous Name: si:dkey-89f23.3

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(Including Attributions)
Location: Chr: 17 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Human ortholog(s) of this gene implicated in nephronophthisis 20. Orthologous to human MAPKBP1 (mitogen-activated protein kinase binding protein 1).
GENE EXPRESSION
All Expression Data: Fig. S13 from Macia et al., 2017
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ii001 Small Deletion Exon 23 Frameshift TALEN
sa11673 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa23006 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa36331 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa42877 Point Mutation Unknown Unknown ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa45595 Point Mutation Unknown Splice Site ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH mapkbp1 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    nephronophthisis 20 Nephronophthisis 20 617271
    DISEASE ASSOCIATED WITH mapkbp1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process RNA splicing (more)
    Cellular Component catalytic step 2 spliceosome (more)
    Molecular Function RNA binding (more)
    GO Terms (all 5)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA mapkbp1-201 (1) 1347
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM mapkbp1 No data available
    MARKER RELATIONSHIPS
    mapkbp1Contained in: [BAC] DKEY-89F23 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:XM_009292858 (1)
    Genomic GenBank:CR352284 (1) 181192bp
    Select Tool
    Polypeptide UniProtKB:A0A2R8Q7W9 (1) 1614aa
    Sequence Clusters UniGene:157195 (1)
    Sequence Information (all 20)
    ORTHOLOGY for mapkbp1 (Chr: 17)
    CITATIONS (16)