ZFIN is now using GRCz12tu for Genomic Data
Gene
cacng5b
- ID
- ZDB-GENE-120104-3
- Name
- calcium channel, voltage-dependent, gamma subunit 5b
- Symbol
- cacng5b Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable channel regulator activity and voltage-gated calcium channel activity. Predicted to be involved in positive regulation of glutamatergic synaptic transmission; postsynaptic neurotransmitter receptor diffusion trapping; and transmission of nerve impulse. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in postsynaptic density membrane. Orthologous to human CACNG5 (calcium voltage-gated channel auxiliary subunit gamma 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Hu et al., 2024
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | PMP-22/EMP/MP20/Claudin | Voltage-dependent calcium channel, gamma-5 subunit | Voltage-dependent calcium channel gamma subunit | Voltage-dependent calcium channel, gamma subunit |
|---|---|---|---|---|---|---|
| UniProtKB:X1WEB1 | InterPro | 275 | ||||
| UniProtKB:A0ACD6B6W8 | InterPro | 275 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cacng5 (1 of many)-201
(1)
|
Ensembl | 1,455 nt | ||
| mRNA |
cacng5b-201
(1)
|
Ensembl | 1,366 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers