Gene

noctb

ID
ZDB-GENE-110930-4
Name
nocturnin b
Symbol
noctb Nomenclature History
Previous Names
  • ccrn4lb
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to have poly(A)-specific ribonuclease activity. Predicted to be involved in circadian regulation of gene expression. Is expressed in eye and retinal photoreceptor layer. Orthologous to human NOCT (nocturnin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Yang et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With noctb Human Ortholog
No data available
Associated With noctb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005135 Endonuclease/exonuclease/phosphatase
Domain IPR034965 Nocturnin, deadenylase domain
Family IPR050410 CCR4/nocturin mRNA turnover and transcription
Homologous_superfamily IPR036691 Endonuclease/exonuclease/phosphatase superfamily
Domain Details Per Protein
Protein Length CCR4/nocturin mRNA turnover and transcription Endonuclease/exonuclease/phosphatase Endonuclease/exonuclease/phosphatase superfamily Nocturnin, deadenylase domain
UniProtKB:A0A0G2KRI0
UniProtKB:F1RDV7
UniProtKB:A0A0G2KET0
UniProtKB:A0A8M9Q2W9 371
UniProtKB:A0A8M9PJP7 378
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA noctb-201 (1) Ensembl 1,353 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Citations