ZFIN is now using GRCz12tu for Genomic Data
Gene
rnf213b
- ID
- ZDB-GENE-110822-1
- Name
- ring finger protein 213b
- Symbol
- rnf213b Nomenclature History
- Previous Names
-
- mysterin b (1)
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in negative regulation of non-canonical Wnt signaling pathway; sprouting angiogenesis; and ubiquitin-dependent protein catabolic process. Predicted to be active in cytosol and nucleolus. Human ortholog(s) of this gene implicated in Moyamoya disease. Orthologous to human RNF213 (ring finger protein 213).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Moyamoya disease | Alliance | {Moyamoya disease 2, susceptibility to} | 607151 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR003593 | AAA+ ATPase domain |
| Domain | IPR046439 | Zinc finger, RZ-type |
| Family | IPR031248 | E3 ubiquitin-protein ligase RNF213 |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Additional Resources | Length | AAA+ ATPase domain | E3 ubiquitin-protein ligase RNF213 | P-loop containing nucleoside triphosphate hydrolase | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site | Zinc finger, RZ-type |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0AB13A8X0 | InterPro | 4974 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
rnf213b-201
(1)
|
Ensembl | 15,366 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers