ZFIN is now using GRCz12tu for Genomic Data
Gene
arhgef40
- ID
- ZDB-GENE-110623-2
- Name
- Rho guanine nucleotide exchange factor (GEF) 40
- Symbol
- arhgef40 Nomenclature History
- Previous Names
-
- zmp:0000001199
- Type
- protein_coding_gene
- Location
- Chr: 7 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable guanyl-nucleotide exchange factor activity. Is expressed in male organism. Orthologous to human ARHGEF40 (Rho guanine nucleotide exchange factor 40).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000219 | Dbl homology domain |
| Domain | IPR001849 | Pleckstrin homology domain |
| Domain | IPR055251 | SOS1/NGEF-like, PH domain |
| Family | IPR052231 | Rho GEF and signaling-related domain-containing protein |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR035899 | Dbl homology (DH) domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Dbl homology (DH) domain superfamily | Dbl homology domain | PH-like domain superfamily | Pleckstrin homology domain | Rho GEF and signaling-related domain-containing protein | SOS1/NGEF-like, PH domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7F579 | InterPro | 1752 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
arhgef40-201
(1)
|
Ensembl | 6,047 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance