Gene

tgm5l

ID
ZDB-GENE-110411-176
Name
transglutaminase 5, like
Symbol
tgm5l Nomenclature History
Previous Names
  • TG-84 (1)
  • si:ch1073-277p6.1
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to enable protein-glutamine gamma-glutamyltransferase activity. Predicted to be involved in phospholipase C-activating G protein-coupled receptor signaling pathway and positive regulation of apoptotic process. Predicted to act upstream of or within peptide cross-linking. Predicted to be active in mitochondrion.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa44381Allele with one point mutationUnknownSplice SiteENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With tgm5l Human Ortholog
No data available
Associated With tgm5l Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001102 Transglutaminase, N-terminal
Domain IPR002931 Transglutaminase-like
Domain IPR008958 Transglutaminase, C-terminal
Family IPR023608 Protein-glutamine gamma-glutamyltransferase, animal
Family IPR050779 Protein-glutamine gamma-glutamyltransferases
1 - 5 of 10 Show all
Domain Details Per Protein
Protein Additional Resources Length Immunoglobulin E-set Immunoglobulin-like fold Papain-like cysteine peptidase superfamily Protein-glutamine gamma-glutamyltransferase, animal Protein-glutamine gamma-glutamyltransferases Transglutaminase, C-terminal Transglutaminase, C-terminal domain superfamily Transglutaminase-like Transglutaminase-like superfamily Transglutaminase, N-terminal
UniProtKB:A0A0R4IGK8 InterPro 685
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 6
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tgm5l-201 (1)
Ensembl
Ensembl 1,241 nt
ZFIN BLAST
mRNA tgm5l-202 (1)
Ensembl
Ensembl 2,402 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inFosmidCH1073-277P6ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:NM_001326491 (1)2316 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:LO017973 (1)45275 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A0R4IGK8 (1)685 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
No data available
Citations
TSV
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