ZFIN ID: ZDB-GENE-110411-114
Gene Name: single-pass membrane protein with aspartate-rich tail 1a
Gene Symbol: smdt1a
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: smdt1, emre (1), si:ch73-211l13.7

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in calcium import into the mitochondrion and mitochondrial calcium ion homeostasis; predicted to localize to the integral component of mitochondrial inner membrane and  ...
GENE EXPRESSION
All Expression Data: Fig. 3 from Soman et al., 2017
Wild-type Stages, Structures: Larval:Protruding-mouth (72.0h-96.0h, 3.5mm) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH smdt1a HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH smdt1a VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process calcium import into the mitochondrion (more)
Cellular Component integral component of membrane (more)
GO Terms (all 5)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR018782 (1)
  • Pfam:PF10161 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA smdt1a-201 (1) 480
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM smdt1a No data available
    MARKER RELATIONSHIPS
    smdt1aContained in: [BAC] CH73-211L13 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    Genomic GenBank:CU672266 (1) 104622bp
    Select Tool
    Polypeptide UniProtKB:F8W2Q5 (1) 124aa
    Sequence Information (all 3)
    OTHER smdt1a GENE PAGES
  • Alliance (1)
  • VEGA:OTTDARG00000034400 (1)
  • Ensembl(GRCz11):ENSDARG00000095826 (1)
  • ORTHOLOGY for smdt1a (Chr: 3)
    CITATIONS (10)