ZFIN is now using GRCz12tu for Genomic Data
Gene
limk1b
- ID
- ZDB-GENE-110411-106
- Name
- LIM domain kinase 1b
- Symbol
- limk1b Nomenclature History
- Previous Names
-
- si:ch211-13l22.4
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in actin cytoskeleton organization and positive regulation of stress fiber assembly. Predicted to be located in cytoskeleton. Predicted to be active in cytoplasm; neuron projection; and nucleus. Orthologous to human LIMK1 (LIM domain kinase 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Binding_site | IPR017441 | Protein kinase, ATP binding site |
| Domain | IPR000719 | Protein kinase domain |
| Domain | IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| Domain | IPR001478 | PDZ domain |
| Domain | IPR001781 | Zinc finger, LIM-type |
| Family | IPR050940 | Actin-regulating Serine/Threonine Kinase |
| Homologous_superfamily | IPR011009 | Protein kinase-like domain superfamily |
| Homologous_superfamily | IPR036034 | PDZ superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Actin-regulating Serine/Threonine Kinase | PDZ domain | PDZ superfamily | Protein kinase, ATP binding site | Protein kinase domain | Protein kinase-like domain superfamily | Serine-threonine/tyrosine-protein kinase, catalytic domain | Zinc finger, LIM-type |
|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:E7FB16 | InterPro | 615 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
limk1b-201
(1)
|
Ensembl | 2,584 nt | ||
| mRNA |
limk1b-202
(1)
|
Ensembl | 806 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers