Gene
bicc1a
- ID
- ZDB-GENE-101223-3
- Name
- BicC family RNA binding protein 1a
- Symbol
- bicc1a Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Description
- Predicted to enable RNA binding activity. Predicted to be active in cytoplasm. Is expressed in midbrain hindbrain boundary and pronephric duct. Human ortholog(s) of this gene implicated in diffuse cystic renal dysplasia. Orthologous to human BICC1 (BicC family RNA binding protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| diffuse cystic renal dysplasia | Alliance | {Renal dysplasia, cystic, susceptibility to} | 601331 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001660 | Sterile alpha motif domain |
| Domain | IPR004087 | K Homology domain |
| Domain | IPR004088 | K Homology domain, type 1 |
| Domain | IPR037974 | BICC1, SAM domain |
| Domain | IPR047549 | BICC1, first type I KH domain |
| Domain | IPR047553 | BICC1, third type I KH domain |
| Domain | IPR047554 | BICC1, second type I KH |
| Domain | IPR054727 | Protein bicaudal C homolog 1, KH-like domain |
| Homologous_superfamily | IPR013761 | Sterile alpha motif/pointed domain superfamily |
| Homologous_superfamily | IPR036612 | K Homology domain, type 1 superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | BICC1, first type I KH domain | BICC1, SAM domain | BICC1, second type I KH | BICC1, third type I KH domain | K Homology domain | K Homology domain, type 1 | K Homology domain, type 1 superfamily | Protein bicaudal C homolog 1, KH-like domain | Sterile alpha motif domain | Sterile alpha motif/pointed domain superfamily |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M3AIX6 | InterPro | 954 | ||||||||||
| UniProtKB:A0A8M9PP15 | InterPro | 990 | ||||||||||
| UniProtKB:X1WGP5 | InterPro | 955 | ||||||||||
| UniProtKB:A0AB32TJJ3 | InterPro | 954 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
bicc1a-201
(1)
|
Ensembl | 5,627 nt | ||
| mRNA |
bicc1a-202
(1)
|
Ensembl | 1,946 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance