ZFIN is now using GRCz12tu for Genomic Data
Gene

ptprr

ID
ZDB-GENE-101029-2
Name
protein tyrosine phosphatase receptor type R
Symbol
ptprr Nomenclature History
Previous Names
  • si:cabz01062511.1
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable protein kinase binding activity and protein tyrosine phosphatase activity. Predicted to be involved in signal transduction. Predicted to act upstream of or within protein dephosphorylation. Predicted to be located in membrane. Predicted to be active in cell junction; cytosol; and plasma membrane. Is expressed in hematopoietic multipotent progenitor cell. Orthologous to human PTPRR (protein tyrosine phosphatase receptor type R).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ptprr Human Ortholog
No data available
Associated With ptprr Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
No data available
Domain Details Per Protein
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ptprr-201 (1) Ensembl 6,360 nt
mRNA ptprr-202 (1) Ensembl 2,026 nt
mRNA ptprr-203 (1) Ensembl 6,360 nt
mRNA ptprr-204 (1) Ensembl 6,360 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations