ZFIN is now using GRCz12tu for Genomic Data
Gene
trak1a
- ID
- ZDB-GENE-100922-182
- Name
- trafficking protein, kinesin binding 1a
- Symbol
- trak1a Nomenclature History
- Previous Names
-
- trak1
- si:ch73-138e9.2
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable GABA receptor binding activity and myosin binding activity. Predicted to be involved in several processes, including endosome to lysosome transport; mitochondrion distribution; and vesicle transport along microtubule. Predicted to be active in cytoplasmic vesicle; dendrite; and mitochondrion. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 68. Orthologous to human TRAK1 (trafficking kinesin protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| developmental and epileptic encephalopathy 68 | Alliance | Developmental and epileptic encephalopathy 68 | 618201 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | HAP1, N-terminal | Intracellular Trafficking Regulator | Trafficking kinesin-binding protein, C-terminal |
|---|---|---|---|---|---|
| UniProtKB:A0A8M3AIV7 | InterPro | 920 | |||
| UniProtKB:E9QJ68 | InterPro | 860 | |||
| UniProtKB:A0A8M3AT45 | InterPro | 890 | |||
| UniProtKB:A0A8M3B1F5 | InterPro | 935 | |||
| UniProtKB:A0A8M3B1F9 | InterPro | 647 | |||
| UniProtKB:A0A8M9PMV3 | InterPro | 704 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trak1a-201
(1)
|
Ensembl | 1,821 nt | ||
| mRNA |
trak1a-202
(1)
|
Ensembl | 5,009 nt | ||
| ncRNA |
trak1-002
(1)
|
Ensembl | 424 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers