Gene

podn

ID

ZDB-GENE-100922-117

Name

podocan

Symbol

podn Nomenclature History

Previous Names

si:ch73-116b16.1

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to localize to extracellular space. Orthologous to human PODN (podocan).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With podn Human Ortholog

No data available

Associated With podn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000372	Leucine-rich repeat N-terminal domain
Family	IPR050333	Small Leucine-Rich Proteoglycans
Homologous_superfamily	IPR032675	Leucine-rich repeat domain superfamily
Repeat	IPR001611	Leucine-rich repeat
Repeat	IPR003591	Leucine-rich repeat, typical subtype

Domain Details Per Protein

Protein	Length	Leucine-rich repeat	Leucine-rich repeat domain superfamily	Leucine-rich repeat N-terminal domain	Leucine-rich repeat, typical subtype	Small Leucine-Rich Proteoglycans
UniProtKB:A0A8M1RJK5 InterPro	593
UniProtKB:A0A8M9PQX2 InterPro	593

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	podn-201 (1) Ensembl	Ensembl		1,593 nt	Select Tool ZFIN BLAST
mRNA	podn-202 (1) Ensembl	Ensembl		4,564 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations