Gene

ptpn23a

ID
ZDB-GENE-100921-24
Name
protein tyrosine phosphatase, non-receptor type 23, a
Symbol
ptpn23a Nomenclature History
Previous Names
  • si:dkey-201i6.7
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Orthologous to human PTPN23 (protein tyrosine phosphatase non-receptor type 23).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from van Eekelen et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ptpn23a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder and structural brain anomalies with or without seizures and spasticity 618890
Associated With ptpn23a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Active_site IPR016130 Protein-tyrosine phosphatase, active site
Domain IPR000242 Tyrosine-specific protein phosphatase, PTPase domain
Domain IPR000387 Tyrosine-specific protein phosphatases domain
Domain IPR003595 Protein-tyrosine phosphatase, catalytic
Domain IPR004328 BRO1 domain
Domain IPR016103 ProQ/FinO domain
Domain IPR025304 ALIX V-shaped domain
Homologous_superfamily IPR029021 Protein-tyrosine phosphatase-like
Homologous_superfamily IPR038499 BRO1 domain superfamily
Domain Details Per Protein
Protein Length ALIX V-shaped domain BRO1 domain BRO1 domain superfamily ProQ/FinO domain Protein-tyrosine phosphatase, active site Protein-tyrosine phosphatase, catalytic Protein-tyrosine phosphatase-like Tyrosine-specific protein phosphatase, PTPase domain Tyrosine-specific protein phosphatases domain
UniProtKB:F1R1D1 1987
UniProtKB:F1Q653 2003
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ptpn23a-201 (1) Ensembl 6,714 nt
mRNA ptpn23a-202 (1) Ensembl 6,761 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations