ZFIN is now using GRCz12tu for Genomic Data
Gene
rimbp2a
- ID
- ZDB-GENE-100920-2
- Name
- RIMS binding protein 2a
- Symbol
- rimbp2a Nomenclature History
- Previous Names
-
- si:ch73-287m6.1
- Type
- protein_coding_gene
- Location
- Chr: 21 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to be involved in neuromuscular synaptic transmission. Predicted to be located in plasma membrane and synapse. Orthologous to human RIMBP2 (RIMS binding protein 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001452 | SH3 domain |
| Domain | IPR003961 | Fibronectin type III |
| Domain | IPR035753 | RIMS-binding protein, second SH3 domain |
| Domain | IPR035755 | RIMS-binding protein, third SH3 domain |
| Domain | IPR057884 | RIMS-binding protein 1/2/3, Fn3 domain |
| Family | IPR040325 | RIMS-binding protein 1/2/3 |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR036028 | SH3-like domain superfamily |
| Homologous_superfamily | IPR036116 | Fibronectin type III superfamily |
Domain Details Per Protein
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
si:ch73-287m6.1-201
(1)
|
Ensembl | 544 nt | ||
| mRNA |
rimbp2-204
(1)
|
Ensembl | 3,471 nt | ||
| mRNA |
rimbp2-205
(1)
|
Ensembl | 3,600 nt | ||
| mRNA |
si:ch73-287m6.1-204
(1)
|
Ensembl | 4,227 nt | ||
| ncRNA |
si:ch73-287m6.1-003
(1)
|
Ensembl | 357 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers
- Comparative Orthology
- Alliance