ZFIN is now using GRCz12tu for Genomic Data
Gene
pogzb
- ID
- ZDB-GENE-100609-3
- Name
- pogo transposable element derived with ZNF domain b
- Symbol
- pogzb Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable metal ion binding activity and nucleic acid binding activity. Human ortholog(s) of this gene implicated in White-Sutton syndrome. Orthologous to human POGZ (pogo transposable element derived with ZNF domain).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| White-Sutton syndrome | Alliance | White-Sutton syndrome | 616364 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004875 | DDE superfamily endonuclease domain |
| Domain | IPR006600 | HTH CenpB-type DNA-binding domain |
| Domain | IPR013087 | Zinc finger C2H2-type |
| Domain | IPR029526 | PiggyBac transposable element-derived protein |
| Homologous_superfamily | IPR009057 | Homedomain-like superfamily |
| Homologous_superfamily | IPR036236 | Zinc finger C2H2 superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | DDE superfamily endonuclease domain | Homedomain-like superfamily | HTH CenpB-type DNA-binding domain | PiggyBac transposable element-derived protein | Zinc finger C2H2 superfamily | Zinc finger C2H2-type |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:F1R5F8 | InterPro | |||||||
| UniProtKB:F1R038 | InterPro | |||||||
| UniProtKB:E7FG56 | InterPro | |||||||
| UniProtKB:A0A8M1RNX0 | InterPro | 1373 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers