Gene

frmpd3

ID

ZDB-GENE-100316-9

Name

FERM and PDZ domain containing 3

Symbol

frmpd3 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 14 Mapping Details/Browsers

Description

Predicted to localize to cytoskeleton. Orthologous to human FRMPD3 (FERM and PDZ domain containing 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With frmpd3 Human Ortholog

No data available

Associated With frmpd3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000299	FERM domain
Domain	IPR001478	PDZ domain
Domain	IPR019748	FERM central domain
Domain	IPR019749	Band 4.1 domain
Domain	IPR041779	FERM and PDZ domain-containing protein 1/3/4, FERM domain C-lobe
Homologous_superfamily	IPR011993	PH-like domain superfamily
Homologous_superfamily	IPR014352	FERM/acyl-CoA-binding protein superfamily
Homologous_superfamily	IPR029071	Ubiquitin-like domain superfamily
Homologous_superfamily	IPR035963	FERM superfamily, second domain
Homologous_superfamily	IPR036034	PDZ superfamily

Domain Details Per Protein

Protein	Length	Band 4.1 domain	FERM/acyl-CoA-binding protein superfamily	FERM and PDZ domain-containing protein 1/3/4, FERM domain C-lobe	FERM central domain	FERM domain	FERM superfamily, second domain	PDZ domain	PDZ superfamily	PH-like domain superfamily	Ubiquitin-like domain superfamily
UniProtKB:A0A8M9Q1D3 InterPro	1715
UniProtKB:F1QKJ4 InterPro	1696
UniProtKB:A0A8M3AZP6 InterPro	1414
UniProtKB:A0A8M9PZJ2 InterPro	1568

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	frmpd3-201 (1) Ensembl	Ensembl	10,809 nt	Select Tool
mRNA	frmpd3-203 (1) Ensembl	Ensembl	519 nt	Select Tool
mRNA	frmpd3-204 (1) Ensembl	Ensembl	4,248 nt	Select Tool ZFIN BLAST
mRNA	frmpd3-205 (1) Ensembl	Ensembl	612 nt	Select Tool ZFIN BLAST
ncRNA	frmpd3-003 (1) Ensembl	Ensembl	252 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations