Gene

afap1

ID
ZDB-GENE-100316-6
Name
actin filament associated protein 1
Symbol
afap1 Nomenclature History
Previous Names
  • im:7148276
Type
protein_coding_gene
Location
Chr: 12 Mapping Details/Browsers
Description
Predicted to be involved in regulation of signal transduction. Predicted to be located in cytoplasm. Predicted to be active in actin filament and cytosol. Is expressed in brain. Human ortholog(s) of this gene implicated in open-angle glaucoma. Orthologous to human AFAP1 (actin filament associated protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With afap1 Human Ortholog
No data available
Associated With afap1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001849 Pleckstrin homology domain
Family IPR030113 Actin-filament associated protein
Homologous_superfamily IPR011993 PH-like domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Actin-filament associated protein PH-like domain superfamily Pleckstrin homology domain
UniProtKB:A0A8M9PMC5 InterPro 810
UniProtKB:A0A8M9PTH1 InterPro 806
UniProtKB:U3JAR6 InterPro 806
UniProtKB:A0A8M9Q3X7 InterPro 735
UniProtKB:A0A8M2B287 InterPro 735
UniProtKB:A0A8M2B299 InterPro 810
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA afap1-201 (1) Ensembl 2,331 nt
mRNA afap1-202 (1) Ensembl 3,128 nt
mRNA afap1-203 (1) Ensembl 870 nt
mRNA afap1-204 (1) Ensembl 2,154 nt
mRNA afap1-205 (1) Ensembl 2,019 nt
mRNA afap1-206 (1) Ensembl 642 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations