Gene

ablim2

ID

ZDB-GENE-100316-5

Name

actin binding LIM protein family, member 2

Symbol

ablim2 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity. Predicted to be involved in lamellipodium assembly. Predicted to localize to actin cytoskeleton. Orthologous to human ABLIM2 (actin binding LIM protein family member 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ablim2 Human Ortholog

No data available

Associated With ablim2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001781	Zinc finger, LIM-type
Domain	IPR003128	Villin headpiece
Domain	IPR032402	Putative adherens-junction anchoring domain
Family	IPR051618	Actin-binding LIM
Homologous_superfamily	IPR036886	Villin headpiece domain superfamily

Domain Details Per Protein

Protein	Length	Actin-binding LIM	Putative adherens-junction anchoring domain	Villin headpiece	Villin headpiece domain superfamily	Zinc finger, LIM-type
UniProtKB:A0A8M9QJ63 InterPro	639
UniProtKB:A0A8M9PAV4 InterPro	684
UniProtKB:A0A8M9PX20 InterPro	601
UniProtKB:A0A8M9PMD6 InterPro	594
UniProtKB:A0A8M3AYH9 InterPro	533
UniProtKB:A0A8M9Q905 InterPro	594
UniProtKB:A0A8M3B4Q6 InterPro	600
UniProtKB:A0A8M9PAV8 InterPro	600
UniProtKB:A0A8M9Q3Y1 InterPro	612
UniProtKB:A0A8M3B7I9 InterPro	612
UniProtKB:A0A8M3AYF8 InterPro	667
UniProtKB:A0A8M3B7I4 InterPro	685
UniProtKB:A0A8M9PTH6 InterPro	639
UniProtKB:A0A8M9QMX6 InterPro	674
UniProtKB:A0A8M9PMD1 InterPro	673
UniProtKB:A0A8M3AYH6 InterPro	683
UniProtKB:A0A8M9Q0P2 InterPro	685
UniProtKB:A0A8M9Q0P6 InterPro	601
UniProtKB:A0A8M3BE85 InterPro	673
UniProtKB:A0A8M3B4P9 InterPro	684

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ablim2-201 (1) Ensembl	Ensembl	1,677 nt	Select Tool ZFIN BLAST
mRNA	ablim2-202 (1) Ensembl	Ensembl	3,234 nt	Select Tool
mRNA	ablim2-203 (1) Ensembl	Ensembl	1,413 nt	Select Tool ZFIN BLAST
mRNA	ablim2-204 (1) Ensembl	Ensembl	1,560 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations