Gene

rnf6

ID
ZDB-GENE-100209-1
Name
ring finger protein (C3H2C3 type) 6
Symbol
rnf6 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Human ortholog(s) of this gene implicated in esophagus squamous cell carcinoma and squamous cell carcinoma. Orthologous to human RNF6 (ring finger protein 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa6766Allele with one point mutationUnknownPremature StopENU
sa15269Allele with one point mutationUnknownPremature StopENU
European Zebrafish Resource Center (EZRC) (order this)
Zebrafish International Resource Center (ZIRC) (order this)
1 - 2 of 2
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Sequence Targeting Reagents
No data available
Human Disease
Associated With rnf6 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
esophageal cancer Alliance Esophageal carcinoma, somatic 133239
1 - 1 of 1
Associated With rnf6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001841 Zinc finger, RING-type
Family IPR051834 RING finger E3 ubiquitin-protein ligase
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
1 - 3 of 3
Domain Details Per Protein
Protein Additional Resources Length RING finger E3 ubiquitin-protein ligase Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type
UniProtKB:A0AB13A423 InterPro 698
1 - 1 of 1
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf6-201 (1)
Ensembl
Ensembl 4,578 nt
ZFIN BLAST
mRNA rnf6-202 (1)
Ensembl
Ensembl 2,097 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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