Gene

rhobtb3

ID
ZDB-GENE-091204-190
Name
Rho related BTB domain containing 3
Symbol
rhobtb3 Nomenclature History
Previous Names
  • si:dkey-6b12.5
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and regulation of proteolysis. Predicted to be active in cytoplasm. Orthologous to human RHOBTB3 (Rho related BTB domain containing 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa37249Allele with one point mutationUnknownPremature StopENU
Zebrafish International Resource Center (ZIRC) (order this)
European Zebrafish Resource Center (EZRC) (order this)
1 - 1 of 1
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Sequence Targeting Reagents
No data available
Human Disease
Associated With rhobtb3 Human Ortholog
No data available
Associated With rhobtb3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000210 BTB/POZ domain
Homologous_superfamily IPR011333 SKP1/BTB/POZ domain superfamily
1 - 2 of 2
Domain Details Per Protein
Protein Additional Resources Length BTB/POZ domain SKP1/BTB/POZ domain superfamily
UniProtKB:E7EYA0 InterPro 619
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 21
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:dkey-6b12.5-201 (1)
Ensembl
Ensembl 2,278 nt
ZFIN BLAST
mRNA si:dkey-6b12.5-202 (1)
Ensembl
Ensembl 5,444 nt
ZFIN BLAST
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-6B12ZFIN Curated Data
Contained inBACDKEY-89G21ZFIN Curated Data
1 - 2 of 2
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_686178 (1)
ZFIN BLASTNCBI BLASTMegaBLASTEnsemblUCSC BLAT
GenomicGenBank:BX511081 (1)210246 nt
MegaBLAST
PolypeptideUniProtKB:E7EYA0 (1)619 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRHOBTB35
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseRhobtb313
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
TSV
1 - 1 of 1
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