ZFIN is now using GRCz12tu for Genomic Data
Gene

gramd1ba

ID
ZDB-GENE-091118-87
Name
GRAM domain containing 1Ba
Symbol
gramd1ba Nomenclature History
Previous Names
  • si:ch211-249g19.1
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
Predicted to enable cholesterol binding activity and cholesterol transfer activity. Predicted to be involved in intracellular sterol transport. Predicted to be located in membrane and organelle membrane contact site. Predicted to be active in endoplasmic reticulum membrane; endoplasmic reticulum-plasma membrane contact site; and plasma membrane. Orthologous to human GRAMD1B (GRAM domain containing 1B).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Thyme et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With gramd1ba Human Ortholog
No data available
Associated With gramd1ba Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR004182 GRAM domain
Domain IPR031968 VASt domain
Family IPR051482 Cholesterol transport domain-containing protein
Homologous_superfamily IPR011993 PH-like domain superfamily
Domain Details Per Protein
Protein Additional Resources Length Cholesterol transport domain-containing protein GRAM domain PH-like domain superfamily VASt domain
UniProtKB:A0A8M9Q6Q6 InterPro 882
UniProtKB:A0A8M3BDB3 InterPro 758
UniProtKB:A0A8M9PT23 InterPro 694
UniProtKB:A0A8M9Q098 InterPro 701
UniProtKB:A0A8M3AX65 InterPro 762
UniProtKB:A0A8M9PAI9 InterPro 722
UniProtKB:A0A8M9PLY7 InterPro 698
UniProtKB:A0AB32TIW2 InterPro 697
UniProtKB:A0AB32TWG8 InterPro 887
UniProtKB:A0AB32TWH4 InterPro 887
UniProtKB:A0AB32TX51 InterPro 874
UniProtKB:A0AB32TYR1 InterPro 878
UniProtKB:A0AB32TYV9 InterPro 871
UniProtKB:A0AB32TZR0 InterPro 870
UniProtKB:A0AB32TZU6 InterPro 882
UniProtKB:A0AB32U1B8 InterPro 880
UniProtKB:A0AB32U1M4 InterPro 823
UniProtKB:A0AB32U1Z8 InterPro 894
UniProtKB:A0AB32U2U6 InterPro 758
UniProtKB:A0AB32U2X9 InterPro 872
UniProtKB:A0AB32U2Y5 InterPro 894
UniProtKB:A0AB32U406 InterPro 895
UniProtKB:A0AB32U417 InterPro 754
UniProtKB:A0AC58GNC1 InterPro 895
UniProtKB:A0AC58GND8 InterPro 799
UniProtKB:A0AC58GND9 InterPro 743
UniProtKB:A0AC58GNE0 InterPro 749
UniProtKB:A0AC58GNE7 InterPro 886
UniProtKB:A0AC58GNE8 InterPro 879
UniProtKB:A0AC58GNE9 InterPro 742
UniProtKB:A0AC58GNF2 InterPro 731
UniProtKB:A0AC58GNF3 InterPro 750
UniProtKB:A0AC58GNF4 InterPro 879
UniProtKB:A0AC58GNF6 InterPro 737
UniProtKB:A0AC58GNF7 InterPro 688
UniProtKB:A0AC58GNF8 InterPro 697
UniProtKB:A0AC58GNF9 InterPro 871
UniProtKB:A0AC58GNG0 InterPro 695
UniProtKB:A0AC58GNG1 InterPro 739
UniProtKB:A0AC58GNG3 InterPro 741
UniProtKB:A0AC58GNG4 InterPro 676
UniProtKB:A0AC58GNG5 InterPro 799
UniProtKB:A0AC58GNG6 InterPro 800
UniProtKB:A0AC58GNH1 InterPro 735
UniProtKB:A0AC58GNH3 InterPro 694
UniProtKB:A0AC58GNI0 InterPro 730
UniProtKB:A0AC58GNI3 InterPro 734
UniProtKB:A0AC58GNK4 InterPro 750
UniProtKB:A0AC58GNL2 InterPro 689
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA gramd1ba-201 (1) Ensembl 2,196 nt
mRNA gramd1ba-202 (1) Ensembl 3,089 nt
mRNA gramd1ba-203 (1) Ensembl 2,858 nt
mRNA gramd1ba-204 (1) Ensembl 3,001 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations