Gene

cnn1b

ID
ZDB-GENE-091118-54
Name
calponin 1, basic, smooth muscle, b
Symbol
cnn1b Nomenclature History
Previous Names
  • si:ch73-346m18.4
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to act upstream of or within actomyosin structure organization. Predicted to be active in actin cytoskeleton. Orthologous to human CNN1 (calponin 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Whitesell et al., 2019
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
nv1382Allele with one deletionUnknownUnknownCRISPR
sa1227Allele with one point mutationUnknownSplice SiteENU
1 - 2 of 2
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Sequence Targeting Reagents
No data available
Human Disease
Associated With cnn1b Human Ortholog
No data available
Associated With cnn1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001715 Calponin homology domain
Family IPR001997 Calponin/LIMCH1
Family IPR003096 Smooth muscle protein/calponin
Family IPR050606 Calponin-like
Homologous_superfamily IPR036872 CH domain superfamily
1 - 5 of 6 Show all
Domain Details Per Protein
Protein Additional Resources Length Calponin homology domain Calponin-like Calponin/LIMCH1 Calponin repeat CH domain superfamily Smooth muscle protein/calponin
UniProtKB:A0A0R4IGU0 InterPro 296
UniProtKB:A0AB32THP6 InterPro 262
1 - 2 of 2
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cnn1b-201 (1) Ensembl 1,080 nt
1 - 1 of 1
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations