Gene

ankrd34ba

ID

ZDB-GENE-091118-17

Name

ankyrin repeat domain 34Ba

Symbol

ankrd34ba Nomenclature History

Previous Names

si:dkey-24n17.10

Type

protein_coding_gene

Location

Chr: 10 Mapping Details/Browsers

Description

Orthologous to human ANKRD34B (ankyrin repeat domain 34B).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Allele	Type	Localization	Consequence	Mutagen	Supplier
sa27538	Allele with one point mutation	Unknown	Missense, Splice Site	ENU

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Sequence Targeting Reagents

No data available

Human Disease

Associated With ankrd34ba Human Ortholog

No data available

Associated With ankrd34ba Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR042637	Ankyrin repeat domain-containing protein AN34A/B/C
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

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Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat-containing domain superfamily	Ankyrin repeat domain-containing protein AN34A/B/C
UniProtKB:E9QC15 InterPro	544

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Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Genome Build: GRCz11Chromosome: 10

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ankrd34ba-201 (1) Ensembl	Ensembl		1,635 nt	Select Tool ZFIN BLAST
mRNA	ankrd34ba-202 (1) Ensembl	Ensembl		1,485 nt	Select Tool ZFIN BLAST

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Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

No data available

Marker Relationships

Relationship	Marker Type	Marker	Accession Numbers	Citations
Contained in	BAC	DKEY-24N17	CR394525	ZFIN Curated Data

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Sequences

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:XM_684338 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:CR394525 (1)	215862 nt	Select Tool MegaBLAST
Polypeptide	UniProtKB:E9QC15 (1)	544 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Species	Symbol	Chromosome	Accession #	Evidence
Human	ANKRD34B	5	Ensembl:ENSG00000189127 Gene:340120 OMIM:618581 HGNC:33736	Conserved genome location (synteny) (1) Amino acid sequence comparison (1)
Mouse	Ankrd34b	13	Ensembl:ENSMUSG00000045034 MGI:2443245 Gene:218440	Amino acid sequence comparison (1) Conserved genome location (synteny) (1)

Citations

Include unpublished citations

Braasch, I., Gehrke, A.R., Smith, J.J., Kawasaki, K., Manousaki, T., Pasquier, J., Amores, A., Desvignes, T., Batzel, P., Catchen, J., Berlin, A.M., Campbell, M.S., Barrell, D., Martin, K.J., Mulley, J.F., Ravi, V., Lee, A.P., Nakamura, T., Chalopin, D., Fan, S., Wcisel, D., Cañestro, C., Sydes, J., Beaudry, F.E., Sun, Y., Hertel, J., Beam, M.J., Fasold, M., Ishiyama, M., Johnson, J., Kehr, S., Lara, M., Letaw, J.H., Litman, G.W., Litman, R.T., Mikami, M., Ota, T., Saha, N.R., Williams, L., Stadler, P.F., Wang, H., Taylor, J.S., Fontenot, Q., Ferrara, A., Searle, S.M., Aken, B., Yandell, M., Schneider, I., Yoder, J.A., Volff, J.N., Meyer, A., Amemiya, C.T., Venkatesh, B., Holland, P.W., Guiguen, Y., Bobe, J., Shubin, N.H., Di Palma, F., Alföldi, J., Lindblad-Toh, K., Postlethwait, J.H. (2016) The spotted gar genome illuminates vertebrate evolution and facilitates human-teleost comparisons. Nature Genetics. 48(4):427-37

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