Gene

ttc39a

ID

ZDB-GENE-091116-42

Name

tetratricopeptide repeat domain 39A

Symbol

ttc39a Nomenclature History

Previous Names

si:ch211-77o19.1
si:ch73-22b20.1

Type

protein_coding_gene

Location

Chr: 8 Mapping Details/Browsers

Description

Orthologous to human TTC39A (tetratricopeptide repeat domain 39A).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ttc39a Human Ortholog

No data available

Associated With ttc39a Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR019412	Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39
Homologous_superfamily	IPR011990	Tetratricopeptide-like helical domain superfamily

Domain Details Per Protein

Protein	Length	Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39	Tetratricopeptide-like helical domain superfamily
UniProtKB:A0A8M2BE96 InterPro	609
UniProtKB:F1QD50 InterPro	598
UniProtKB:A0A8M9QE22 InterPro	416

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ttc39a-201 (1) Ensembl	Ensembl		1,788 nt	Select Tool ZFIN BLAST
mRNA	ttc39a-202 (1) Ensembl	Ensembl		842 nt	Select Tool ZFIN BLAST
mRNA	ttc39a-203 (1) Ensembl	Ensembl		2,600 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations