Gene

slc4a5b

ID
ZDB-GENE-091112-19
Name
solute carrier family 4 member 5b
Symbol
slc4a5b Nomenclature History
Previous Names
  • slc4a5
  • sb:eu385
  • si:ch211-161n19.2
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have sodium:bicarbonate symporter activity. Predicted to be involved in bicarbonate transport and regulation of intracellular pH. Is expressed in pronephric duct; retina; retinal photoreceptor layer; swim bladder; and swim bladder bud. Orthologous to human SLC4A5 (solute carrier family 4 member 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With slc4a5b Human Ortholog
No data available
Associated With slc4a5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR011531 Bicarbonate transporter-like, transmembrane domain
Domain IPR013769 Band 3 cytoplasmic domain
Family IPR003020 Bicarbonate transporter, eukaryotic
Family IPR003024 Sodium bicarbonate cotransporter
Homologous_superfamily IPR016152 Phosphotransferase/anion transporter
Domain Details Per Protein
Protein Length Band 3 cytoplasmic domain Bicarbonate transporter, eukaryotic Bicarbonate transporter-like, transmembrane domain Phosphotransferase/anion transporter Sodium bicarbonate cotransporter
UniProtKB:A0A8M9QLB8 1088
UniProtKB:A0A8M9PUG6 1057
UniProtKB:A0A8M9QCR8 1052
UniProtKB:A0A8M9Q6S5 1054
UniProtKB:A0A8M9QLC1 1050
UniProtKB:A0A8M9QHC7 1038
UniProtKB:A0A8M9QHC3 1088
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA slc4a5b-201 (1) Ensembl 6,115 nt
mRNA slc4a5b-203 (1) Ensembl 3,123 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations