ZFIN is now using GRCz12tu for Genomic Data
Gene
vtg8
- ID
- ZDB-GENE-091106-1
- Name
- vitellogenin 8
- Symbol
- vtg8 Nomenclature History
- Previous Names
-
- si:dkey-4c23.3
- vtg1-1 (1)
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable lipid transporter activity. Predicted to be involved in cellular response to estrogen stimulus and response to estradiol. Predicted to act upstream of or within lipid transport. Is expressed in intestine; liver; and ovary.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Levi et al., 2012
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001747 | Vitellogenin, N-terminal |
| Domain | IPR001846 | von Willebrand factor, type D domain |
| Domain | IPR015255 | Vitellinogen, open beta-sheet |
| Domain | IPR015258 | Vitellinogen, beta-sheet shell |
| Family | IPR050733 | Vitellogenin/Apolipophorin |
| Homologous_superfamily | IPR011030 | Lipovitellin-phosvitin complex, superhelical domain |
| Homologous_superfamily | IPR015816 | Vitellinogen, beta-sheet N-terminal |
| Homologous_superfamily | IPR015817 | Vitellinogen, open beta-sheet, subdomain 1 |
| Homologous_superfamily | IPR015819 | Lipid transport protein, beta-sheet shell |
| Homologous_superfamily | IPR037088 | Vitellinogen, beta-sheet shell domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Lipid transport protein, beta-sheet shell | Lipovitellin-phosvitin complex, superhelical domain | Vitellinogen, beta-sheet N-terminal | Vitellinogen, beta-sheet shell | Vitellinogen, beta-sheet shell domain superfamily | Vitellinogen, open beta-sheet | Vitellinogen, open beta-sheet, subdomain 1 | Vitellogenin/Apolipophorin | Vitellogenin, N-terminal | von Willebrand factor, type D domain |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9PDK6 | InterPro | 1553 | ||||||||||
| UniProtKB:A0A8M9PST4 | InterPro | 1553 | ||||||||||
| UniProtKB:A0AB32TGQ9 | InterPro | 1517 | ||||||||||
| UniProtKB:A0AB32TQK2 | InterPro | 1409 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-4c23.3-201
(1)
|
Ensembl | 4,489 nt | ||
| mRNA |
vtg8-202
(1)
|
Ensembl | 4,524 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers