ZFIN is now using GRCz12tu for Genomic Data
Gene
usp54a
- ID
- ZDB-GENE-090828-2
- Name
- ubiquitin specific peptidase 54a
- Symbol
- usp54a Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable cysteine-type deubiquitinase activity. Predicted to act upstream of or within protein deubiquitination. Orthologous to human USP54 (ubiquitin specific peptidase 54).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Papain-like cysteine peptidase superfamily | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Ubiquitin carboxyl-terminal hydrolase 53/54 | Ubiquitin specific protease UPS, catalytic domain |
|---|---|---|---|---|---|---|
| UniProtKB:A0A8M9Q9T0 | InterPro | 832 | ||||
| UniProtKB:E7F383 | InterPro | 1270 | ||||
| UniProtKB:A0A140LGR1 | InterPro | 1497 | ||||
| UniProtKB:A0A8M9PXY5 | InterPro | 1457 | ||||
| UniProtKB:A0AB32T274 | InterPro | 1457 | ||||
| UniProtKB:A0AB32T559 | InterPro | 832 | ||||
| UniProtKB:A0AC58H1D5 | InterPro | 1457 | ||||
| UniProtKB:A0AC58H1D6 | InterPro | 1046 | ||||
| UniProtKB:A0AC58H1D8 | InterPro | 1230 | ||||
| UniProtKB:A0AC58H1D9 | InterPro | 1270 | ||||
| UniProtKB:A0AC58H1E0 | InterPro | 1270 | ||||
| UniProtKB:A0AC58H1E1 | InterPro | 1270 | ||||
| UniProtKB:A0AC58H1E2 | InterPro | 1497 | ||||
| UniProtKB:A0AC58H1E3 | InterPro | 1497 | ||||
| UniProtKB:A0AC58H1E4 | InterPro | 1457 | ||||
| UniProtKB:A0AC58H1E5 | InterPro | 859 | ||||
| UniProtKB:A0AC58H1F4 | InterPro | 1086 | ||||
| UniProtKB:A0AC58H1F8 | InterPro | 1457 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
usp54a-201
(1)
|
Ensembl | 3,813 nt | ||
| mRNA |
usp54a-202
(1)
|
Ensembl | 6,913 nt | ||
| mRNA |
usp54a-203
(1)
|
Ensembl | 6,693 nt | ||
| mRNA |
usp54a-205
(1)
|
Ensembl | 5,151 nt | ||
| mRNA |
usp54a-206
(1)
|
Ensembl | 5,271 nt | ||
| mRNA |
usp54a-207
(1)
|
Ensembl | 4,784 nt | ||
| ncRNA |
usp54a-002
(1)
|
Ensembl | 538 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers