Gene

pcdh17

ID
ZDB-GENE-090608-3
Name
protocadherin 17
Symbol
pcdh17 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 11 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity. Acts upstream of or within axon extension; axon guidance; and camera-type eye photoreceptor cell differentiation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; immature eye; retina; spinal cord; and spinal cord neural tube. Orthologous to human PCDH17 (protocadherin 17).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
21 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcdh17 Human Ortholog
No data available
Associated With pcdh17 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Domain IPR013164 Cadherin, N-terminal
Family IPR030709 Protocadherin-17
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin conserved site Cadherin-like Cadherin-like superfamily Cadherin, N-terminal Protocadherin-17
UniProtKB:C4P342 1137
UniProtKB:Q0E9Q8 421
UniProtKB:A0A0B5JFA0 679
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations