Gene
trim16
- ID
- ZDB-GENE-090512-6
- Name
- tripartite motif containing 16
- Symbol
- trim16 Nomenclature History
- Previous Names
-
- sb:eu454
- Type
- protein_coding_gene
- Location
- Chr: 12 Mapping Details/Browsers
- Description
- Predicted to have zinc ion binding activity. Is expressed in yolk syncytial layer. Orthologous to human TRIM16 (tripartite motif containing 16).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2005
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu454 (5 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000315 | B-box-type zinc finger |
| Domain | IPR001870 | B30.2/SPRY domain |
| Domain | IPR003877 | SPRY domain |
| Domain | IPR003879 | Butyrophylin-like, SPRY domain |
| Domain | IPR006574 | SPRY-associated |
| Family | IPR051051 | E3 ubiquitin-protein ligase TRIM/RNF |
| Homologous_superfamily | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily |
| Homologous_superfamily | IPR043136 | B30.2/SPRY domain superfamily |
Domain Details Per Protein
| Protein | Length | B30.2/SPRY domain | B30.2/SPRY domain superfamily | B-box-type zinc finger | Butyrophylin-like, SPRY domain | Concanavalin A-like lectin/glucanase domain superfamily | E3 ubiquitin-protein ligase TRIM/RNF | SPRY-associated | SPRY domain |
|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M6Z1Z2
|
586 | ||||||||
|
UniProtKB:A0A8M1P9M9
|
589 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trim16-201
(1)
|
Ensembl | 2,230 nt |
Interactions and Pathways
No data available
Plasmids
No data available