ZFIN is now using GRCz12tu for Genomic Data
Gene
thumpd2
- ID
- ZDB-GENE-090428-2
- Name
- THUMP domain containing 2
- Symbol
- thumpd2 Nomenclature History
- Previous Names
- None
- Type
- protein_coding_gene
- Location
- Chr: 17 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable tRNA (guanine) methyltransferase activity. Predicted to be involved in tRNA methylation. Predicted to act upstream of or within methylation. Predicted to be part of tRNA methyltransferase complex. Orthologous to human THUMPD2 (THUMP domain 2 tRNA and snRNA guanosine methyltransferase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain | S-adenosyl-L-methionine-dependent methyltransferase superfamily | THUMP domain |
|---|---|---|---|---|---|
| UniProtKB:X1WET5 | InterPro | 446 | |||
| UniProtKB:A0A8M3B2E9 | InterPro | 283 | |||
| UniProtKB:A0A8M9PVI1 | InterPro | 283 | |||
| UniProtKB:A0A8M9PP87 | InterPro | 446 | |||
| UniProtKB:A0AA70QG17 | InterPro | 446 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
thumpd2-202
(1)
|
Ensembl | 1,469 nt | ||
| ncRNA |
thumpd2-002
(1)
|
Ensembl | 536 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers