Gene
tarbp1
- ID
- ZDB-GENE-090313-346
- Name
- TAR (HIV-1) RNA binding protein 1
- Symbol
- tarbp1 Nomenclature History
- Previous Names
-
- si:dkey-85a20.2
- si:dkey-85a20.4
- Type
- protein_coding_gene
- Location
- Chr: 13 Mapping Details/Browsers
- Description
- null
- Genome Resources
- Note
-
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001537 | tRNA/rRNA methyltransferase, SpoU type |
| Domain | IPR044748 | Trm3/ TARBP1, C-terminal |
| Family | IPR025806 | Probable methyltransferase TARBP1 |
| Family | IPR045330 | Probable methyltransferase Trm3/TARBP1 |
| Homologous_superfamily | IPR016024 | Armadillo-type fold |
| Homologous_superfamily | IPR029026 | tRNA (guanine-N1-)-methyltransferase, N-terminal |
| Homologous_superfamily | IPR029028 | Alpha/beta knot methyltransferases |
Domain Details Per Protein
| Protein | Length | Alpha/beta knot methyltransferases | Armadillo-type fold | Probable methyltransferase TARBP1 | Probable methyltransferase Trm3/TARBP1 | Trm3/ TARBP1, C-terminal | tRNA (guanine-N1-)-methyltransferase, N-terminal | tRNA/rRNA methyltransferase, SpoU type |
|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M6Z979
|
1180 | |||||||
|
UniProtKB:A0A8M6Z1S9
|
1578 | |||||||
|
UniProtKB:A0A8M1QV42
|
1579 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-85a20.4-201
(1)
|
Ensembl | 4,713 nt | ||
| mRNA |
si:dkey-85a20.4-202
(1)
|
Ensembl | 1,187 nt | ||
| mRNA |
si:dkey-85a20.4-203
(1)
|
Ensembl | 2,061 nt | ||
| mRNA |
si:dkey-85a20.4-204
(1)
|
Ensembl | 894 nt |
Interactions and Pathways
No data available
Plasmids
No data available