ZFIN ID: ZDB-GENE-090313-165
Gene Name: chemokine (C-X-C motif) ligand 18b
Gene Symbol: cxcl18b    Nomenclature History

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Previous Names: cxcl-c1c, cxcl-chr1c (1), CXCL-Clc (1), dr-chr25-CXCL11-28.0-EP27297 (1), si:ch73-6k14.1 (2)

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 1 Mapping Details/Browsers
Description: Exhibits chemokine activity and granulocyte colony-stimulating factor binding activity. Involved in granulocyte chemotaxis. Predicted to localize to extracellular space.
Genome Resources: Alliance (1),  Gene:795785 (1),  Ensembl(GRCz11):ENSDARG00000075045 (2)
GENE EXPRESSION
All Expression Data: 11 figures from 7 publications
Wild-type Stages, Structures: Pharyngula:Prim-5 (24.0h-30.0h) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa14424 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH cxcl18b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cxcl18b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process granulocyte chemotaxis (more)
    Cellular Component extracellular region (more)
    Molecular Function chemokine activity (more)
    GO Terms (all 13)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA cxcl18b-201 (1)    Ensembl 1101
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM cxcl18b
    Construct Regulatory Regions Coding Sequences Species Tg Lines Publications
    Tg(cxcl18b:EGFP) cxcl18b EGFP Danio rerio 1 1
    MARKER RELATIONSHIPS
    cxcl18b Contained in: [BAC] CH73-6K14 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001115060 (1) 565 nt
    Genomic GenBank:CU075733 (1) 99363 nt
    Select Tool
    Polypeptide UniProtKB:A9ZPF8 (1) 114 aa
    Sequence Information (all 7)
    ORTHOLOGY for cxcl18b ( Chr: 1 )
    CITATIONS (74)