Gene

bend3

ID

ZDB-GENE-090312-181

Name

BEN domain containing 3

Symbol

bend3 Nomenclature History

Previous Names

si:ch211-206k20.6

Type

protein_coding_gene

Location

Chr: 13 Mapping Details/Browsers

Description

Predicted to enable rDNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II and rDNA heterochromatin formation. Predicted to be located in heterochromatin. Orthologous to human BEND3 (BEN domain containing 3).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With bend3 Human Ortholog

No data available

Associated With bend3 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR018379	BEN domain
Family	IPR033583	BEN domain-containing protein 3

Domain Details Per Protein

Protein	Length	BEN domain	BEN domain-containing protein 3
UniProtKB:A0A8M9QFH3 InterPro	813
UniProtKB:B7ZD94 InterPro	816

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	bend3-201 (1) Ensembl	Ensembl		4,176 nt	Select Tool ZFIN BLAST
mRNA	bend3-202 (1) Ensembl	Ensembl		353 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations