Gene
limch1a
- ID
- ZDB-GENE-090312-153
- Name
- LIM and calponin homology domains 1a
- Symbol
- limch1a Nomenclature History
- Previous Names
-
- si:ch211-157h5.2
- Type
- protein_coding_gene
- Location
- Chr: 1 Mapping Details/Browsers
- Description
- Predicted to enable myosin II head/neck binding activity. Predicted to be involved in positive regulation of stress fiber assembly and regulation of focal adhesion assembly. Predicted to act upstream of or within actomyosin structure organization. Predicted to be active in stress fiber. Is expressed in trunk vasculature. Orthologous to human LIMCH1 (LIM and calponin homology domains 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Kartopawiro et al., 2014
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Calponin homology domain | Calponin/LIMCH1 | CH domain superfamily | Domain of unknown function DUF4757 | Smooth muscle protein/calponin | Zinc finger, LIM-type |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M9PV51
|
1844 | ||||||
|
UniProtKB:A0A8M9PHW0
|
1960 | ||||||
|
UniProtKB:A0A8M2BFN7
|
1057 | ||||||
|
UniProtKB:A0A8M9Q153
|
1068 | ||||||
|
UniProtKB:A0A8M2BG98
|
1138 | ||||||
|
UniProtKB:B8A4X7
|
1019 | ||||||
|
UniProtKB:A0A8M9PV53
|
1572 | ||||||
|
UniProtKB:A0A8M9QBW7
|
1854 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
limch1a-201
(1)
|
Ensembl | 3,454 nt | ||
| ncRNA |
limch1a-002
(1)
|
Ensembl | 931 nt |
Interactions and Pathways
No data available
Plasmids
No data available