Gene

raph1b

ID
ZDB-GENE-090311-54
Name
Ras association (RalGDS/AF-6) and pleckstrin homology domains 1b
Symbol
raph1b Nomenclature History
Previous Names
  • sb:eu2484
  • si:dkey-1h24.3
Type
protein_coding_gene
Location
Chr: 1 Mapping Details/Browsers
Description
Predicted to be involved in signal transduction. Predicted to localize to cytosol and plasma membrane. Is expressed in several structures, including central nervous system; gut; mesoderm; pectoral fin; and retinal neural layer. Orthologous to human RAPH1 (Ras association (RalGDS/AF-6) and pleckstrin homology domains 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With raph1b Human Ortholog
No data available
Associated With raph1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000159 Ras-associating domain
Domain IPR001849 Pleckstrin homology domain
Domain IPR039665 APBB1IP, PH domain
Family IPR039664 GRB/APBB1IP
Homologous_superfamily IPR011993 PH-like domain superfamily
Homologous_superfamily IPR029071 Ubiquitin-like domain superfamily
Domain Details Per Protein
Protein Length APBB1IP, PH domain GRB/APBB1IP PH-like domain superfamily Pleckstrin homology domain Ras-associating domain Ubiquitin-like domain superfamily
UniProtKB:A0A8M3AQ39 1565
UniProtKB:F1QZE7 1511
UniProtKB:B0R0R1 1486
UniProtKB:A0A8M2B6V0 1536
UniProtKB:A0A8M3B1A3 1540
UniProtKB:A0A8M2B6R8 1261
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA raph1b-201 (1) Ensembl 6,134 nt
mRNA raph1b-202 (1) Ensembl 614 nt
mRNA raph1b-203 (1) Ensembl 4,086 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations