Gene

mid2

ID
ZDB-GENE-090220-1
Name
midline 2
Symbol
mid2 Nomenclature History
Previous Names
  • trim1 (1)
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have zinc ion binding activity. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability. Is expressed in brain; female organism; ovary; and testis. Orthologous to human MID2 (midline 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Boudinot et al., 2011
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With mid2 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
non-syndromic X-linked intellectual disability 101 Alliance ?Intellectual developmental disorder, X-linked 101 300928
Associated With mid2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003649 B-box, C-terminal
Domain IPR003877 SPRY domain
Domain IPR003879 Butyrophylin-like, SPRY domain
Domain IPR003961 Fibronectin type III
Domain IPR017903 COS domain
Domain IPR027370 Zinc finger, RING-type, eukaryotic
Domain IPR035752 TRIM1, PRY/SPRY domain
Domain IPR040859 Midline-1, COS domain
Domain IPR047063 Probable E3 ubiquitin-protein ligase MID2, B-box-type 2 zinc finger
Domain IPR047064 Probable E3 ubiquitin-protein ligase MID2, B-box-type 1 zinc finger
Family IPR050617 E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR036116 Fibronectin type III superfamily
Homologous_superfamily IPR043136 B30.2/SPRY domain superfamily
Domain Details Per Protein
Protein Length B30.2/SPRY domain B30.2/SPRY domain superfamily B-box, C-terminal B-box-type zinc finger Butyrophylin-like, SPRY domain Concanavalin A-like lectin/glucanase domain superfamily COS domain E3 ubiquitin-protein ligases and FN3/SPRY domain-containing proteins Fibronectin type III Fibronectin type III superfamily Immunoglobulin-like fold Midline-1, COS domain Probable E3 ubiquitin-protein ligase MID2, B-box-type 1 zinc finger Probable E3 ubiquitin-protein ligase MID2, B-box-type 2 zinc finger SPRY domain TRIM1, PRY/SPRY domain Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site Zinc finger, RING-type, eukaryotic
UniProtKB:A0A8M3AHW0 718
UniProtKB:A0A8M3AGM4 696
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA mid2-201 (1) Ensembl 2,306 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations