Gene

barx2

ID
ZDB-GENE-081120-4
Name
BARX homeobox 2
Symbol
barx2 Nomenclature History
Previous Names
  • si:ch73-374a6.1
Type
protein_coding_gene
Location
Chr: 18 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in animal organ development; regulation of transcription by RNA polymerase II; and tissue development. Predicted to localize to nucleus. Is expressed in epithelium; immature eye; pectoral fin; pectoral fin bud; and pharyngeal arch. Orthologous to human BARX2 (BARX homeobox 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Sperber et al., 2008
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With barx2 Human Ortholog
No data available
Associated With barx2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR000047 Helix-turn-helix motif
Conserved_site IPR017970 Homeobox, conserved site
Domain Details Per Protein
Protein Length Helix-turn-helix motif Homeobox, conserved site
UniProtKB:F6NKZ9 268
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA barx2-201 (1) Havana 991 nt
mRNA barx2-202 (1) Ensembl 729 nt
mRNA barx2-203 (1) Ensembl 759 nt
mRNA barx2-204 (1) Ensembl 783 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations